1. 云南省重点研发项目子课题“云南生态系统碳储量和碳汇的全面估测”. 2023 -2025. 主持

2. 云南大学委托项目“基于样地调查技术和方法的云南林草生态系统植被和土壤碳汇评估”. 2023. 主持

3. 中国科学院A类先导专项子课题“草畜动态平衡系统及区域特征分析”. 2020 -2025. 参与

4. 云南省基础研究重大项目课题“云南植被资源动态监测与综合数据管理平台”. 2021-2024. 参与

5. 云南省社会发展专项子课题“云南高原湖泊生态保护关键技术研究及示范”. 2021-2024. 参与

代表性论文：

1. Yang YH#, Shi Y#, Sun WJ#, Chang JF#, Zhu JX, Chen LY, Wang X, Guo YP, Zhang HT, Yu LF, Zhao SQ, Xu K, Zhu JL, Shen HH, Wang YY, Peng YF, Zhao X, Wang XP, Hu HF, Chen SP, Huang M, Wen XF, Wang SP, Zhu B, Niu SL, Tang ZY, Liu LF, Fang JY*.  2022. Terrestrial carbon sinks in China and around the world and their contribution to carbon neutrality. Science China-Life Sciences, 65: 861-895. (ISI高被引论文)

2. Feng YP#, Shi Y#, Zhao MY, Shen HH, Xu LC, Luo YK, Liu YZ, Xing AJ, Kang J, Jing HC, Fang JY*. 2022. Yield and quality properties of alfalfa (Medicago sativa L.) and their influencing factors in China. European Journal of Agronomy,  141: 126637.

3. Shi Y, Wang YH, Ma YL, Ma WH, Liang CZ, Flynn DFB, Schmid B, Fang JY, He JS*. 2014. Field-based observations of regional-scale, temporal variation in net primary production in Tibetan alpine grasslands. Biogeosciences, 11: 2003-2016.

4. Shi Y, Ma YL, Ma WH, Liang CZ, Zhao XQ, Fang JY, He JS*. 2013. Large scale patterns of forage yield and quality across Chinese grasslands. Chinese Science Bulletin, 58: 1187-1199.

5. Shi Y, Baumann F, Ma Y, Song C, Kühn P, Scholten T, He JS. 2012.  Organic and inorganic carbon in the topsoil of the Mongolian and Tibetan grasslands: pattern, control and implications. Biogeosciences, 9: 2287-2299.

6. 石岳, 赵霞, 朱江玲, 方精云*. 2022. “山水林田湖草沙”的形成, 功能及保护. 自然杂志, 44: 1-18 (《新华文摘》全文转载)